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    Metagenomics

    Metagenomics is the holistic analysis of the genomes of organisms within an environmentally-obtained sample.

    Webinars

    • SEP 14, 2017 | 9:00 AM
      Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
      Development of tools enabling tunable, in situ delivery of therapeutics...
      The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
      Speaker: Nathan Crook, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      MAY 22, 2017 | 8:00 AM
      WEBINAR: Interactions between the Mycobiome and Bacteriome: Impact on Health and Disease
      WEBINAR: Interactions between the Mycobiome and Bacteriome: Impact...
      DATE: May 22, 2017TIME: 8:00AM PDT, 11:00AM ETCrohn's disease (CD) results from a complex interplay between host genetic factors and endogenous microbial communities. In the current...
      Speaker: Mahmoud Ghannoum, PHD, MBA, FIDSA, FAAM , Shuiquan Tang, PhD
      Sponsored By: Zymo Research
      9
      APR 13, 2017 | 9:00 AM
      Keynote Presentation - DNA Standards and Bioinformatics Benchmarks for Metagenomics
      Keynote Presentation - DNA Standards and Bioinformatics Benchmarks...
      Genomics and metagenomics have become ubiquitous research efforts.  Here we will show details of the development of physical, computational, and even space-based standards for metagenomi...
      Speaker: Christopher Mason, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2017
      2
      APR 12, 2017 | 1:30 PM
      Perspectives for Whole Cell Microbial Reference Materials
      Perspectives for Whole Cell Microbial Reference Materials
      With the exception of the Microbiome Quality Control (MBQC), very little has been published on best practices and reference standards for microbiome and metagenomic studies. As evidenced by r...
      Speaker: J. Russ Carmical, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2017
      2
      APR 12, 2017 | 6:00 AM
      Standards for Microbiome and Metagenomics:  Supporting the Commercial Translation of Microbiome Science
      Standards for Microbiome and Metagenomics: Supporting the Commercial...
      In spite of the huge potential impact of microbiome science, current measurement capabilities are insufficient, particularly for translating discoveries and correlations observed in the lab i...
      Speaker: Jason Kralj, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2017
      4
      FEB 22, 2017 | 9:00 AM
      The Microbiome-Gut-Brain Axis: Linking Gastrointestinal and Neurobehavioral Processes in Autism Spectrum Disorder
      The Microbiome-Gut-Brain Axis: Linking Gastrointestinal and Neurobehavioral...
      Gastrointestinal (GI) disorders are now widely recognized as a clinical symptom of autism spectrum disorder (ASD), and research into the microbiome-gut-brain axis is beginning to reveal the i...
      Speaker: Ruth Luna, PhD, MB (ASCP) CM
      Presented at: Precision Medicine Virtual Event Series 2017
      6
      JAN 31, 2017 | 9:00 AM
      WEBINAR: Networks of exchanging antibiotic resistance across human commensal, environmental, and pathogenic bacteria
      WEBINAR: Networks of exchanging antibiotic resistance across human...
      DATE: January 31, 2017TIME: 9:00AM PT, 12:00PM ET Gautam Dantas - While the most acute effects of increasing antibiotic resistance in pathogens are observed in clinical se...
      Speaker: Gautam Dantas, PhD , Shuiquan Tang, PhD
      Sponsored By: Zymo Research, Zymo Research
      18 14
      NOV 03, 2016 | 6:00 AM
      Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
      Mutation Detection Simplified: From Liquid Biopsy in clinical...
      Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
      Speaker: Gerd Michel, PhD , Lou Welebob
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
      5
      SEP 08, 2016 | 12:00 PM
      Plant Viruses: Everywhere and Often Mutualistic
      Plant Viruses: Everywhere and Often Mutualistic
       Virus Ecology is a field that is gaining momentum, fueled in part by metagenomic studies from many environments previously ignored. Biodiversity studies of plant viruses show that they...
      Speaker: Marilyn Roossinck, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2016
      4
      SEP 08, 2016 | 12:00 PM
      Metagenomics: Influencing Agriculture, Environment and More
      Metagenomics: Influencing Agriculture, Environment and More
      This presentation will be demonstrating several different approaches to explore the diversity, function, and ecology of microbial communities.  In Metagenomics, the sequencing of DNA dir...
      Speaker: Clotilde Teiling
      Presented at: Microbiology & Immunology Virtual Event Series 2016
      3
      SEP 08, 2016 | 10:30 AM
      The Serious Science of Schmutz: Deep-sequencing the built environment
      The Serious Science of Schmutz: Deep-sequencing the built environment
      The global trend towards industrialization and urbanization has led to ever more people living and working indoors. Some studies estimate that humans in industrialized countries spend as much...
      Speaker: Scott Kelley, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2016
      3
      SEP 08, 2016 | 6:00 AM
      Microbial pathogenesis and host immune response
      Microbial pathogenesis and host immune response
      The research community has begun correlating the makeup of individual microbiomes with disorders and diseases such as obesity, atherosclerosis and cancer. To accomplish this, researchers must...
      Speaker: Krishnan Allampallam, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2016
      5
      SEP 07, 2016 | 6:00 AM
      Invisible Influence: How the indoor microbiome influences health
      Invisible Influence: How the indoor microbiome influences health
      The human race, like all macrobiological life, evolved in a sea of microbes. There was no way to keep the bacterial and archaeal hoards at bay, so instead life evolved mechanisms to live with...
      Speaker: Jack Gilbert, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2016
      2
      JUN 09, 2016 | 9:00 AM
      Standardizing Microbiomics
      Standardizing Microbiomics
      DATE:  June 9, 2016 TIME:   9AM Pacific time, 12pm Eastern time The rapid growth of Microbiomics has increased the demand for standard methods to improve the reproducibility and...
      Speaker: Ryan Kemp, M.S. , Shuiquan Tang, PhD
      Sponsored By: Zymo Research, Zymo Research
      13
      MAY 11, 2016 | 12:00 PM
      Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
      Assembly and Analysis of Non-model Organism Transcriptomes Using...
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
      Speaker: Matthew Keyser, MS
      Presented at: Genetics and Genomics Virtual Event Series 2016
      2
      NOV 11, 2015 | 12:00 PM
      DNASTAR Software for Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
      DNASTAR Software for Accurate Variant Detection and Validation...
      DNASTAR offers an integrated suite of software for accurate assembly, alignment, and analysis of sequence data from all major next-generation sequencing platforms, supporting key workflows in...
      Speaker: Matthew Keyser, MS
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2015
      0
      SEP 03, 2015 | 3:00 PM
      Next-Generation Sequencing for Diagnosis and Surveillance of Emerging Infections
      Next-Generation Sequencing for Diagnosis and Surveillance of Emerging...
      Next-generation sequencing (NGS) technologies are powerful approaches for diagnosis and surveillance of emerging infections. Unbiased metagenomic NGS can detect the full spectrum of pathogen...
      Speaker: Charles Chiu, MD, PhD
      Presented at: Microbiology Virtual Event Series 2015
      2
      SEP 03, 2015 | 12:00 PM
      Applying the MinION: microbial genomics and complex metagenomics
      Applying the MinION: microbial genomics and complex metagenomics
      Oxford Nanopore's MinION is a small, portable USB-powered sensing device which is powered by nanopore technology. It is adaptable to the analysis of DNA, RNA, proteins or small molecules, and...
      Speaker: Daniel Turner, PhD
      Presented at: Microbiology Virtual Event Series 2015
      6
      SEP 02, 2015 | 12:00 PM
      DNASTAR Software for Assembly and Analysis of Microbial Genomes
      DNASTAR Software for Assembly and Analysis of Microbial Genomes
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data for key NGS workflows, including microbial genome assembly. The DNASTAR assembly software is...
      Speaker: Matthew Keyser, MS
      Presented at: Microbiology Virtual Event Series 2015
      3
      SEP 02, 2015 | 9:00 AM
      Keynote: Immunology and the Microbiome
      Keynote: Immunology and the Microbiome
      The human race, like all macrobiological life, evolved in a sea of microbes. There was no way to keep the bacterial and archaeal hoards at bay, so instead life evolved mechanisms to live with...
      Speaker: Jack Gilbert, BSc, PhD
      Presented at: Microbiology Virtual Event Series 2015
      10
      SEP 02, 2015 | 6:00 AM
      Rapid Tests to Decipher Microbiome Function in Health and Disease
      Rapid Tests to Decipher Microbiome Function in Health and Disease
      Human microbiome projects have delivered our first glimpse into the microbial communities that reside in and on our bodies. Building on these efforts the research community has begun to corre...
      Speaker: Anisha Kharkia, MS
      Presented at: Microbiology Virtual Event Series 2015
      10
      SEP 02, 2015 | 6:00 AM
      Structure and Function of the Human Microbiome
      Structure and Function of the Human Microbiome
      Among many surprising insights, the genomic revolution has helped us to realize that we're never alone and, in fact, barely human. For most of our lives, we share our bodies with some ten ti...
      Speaker: Curtis Huttenhower, PhD
      Presented at: Microbiology Virtual Event Series 2015
      9
      MAY 13, 2015 | 12:00 PM
      DNASTAR Software For Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
      DNASTAR Software For Accurate Variant Detection and Validation...
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including targe...
      Speaker: Matthew Keyser, MS
      Presented at: Genetics and Genomics Virtual Event Series 2015
      2
      AUG 21, 2014 | 12:15 PM
      A Next-Gen Sequencing Software Workflow for Gene Panel Validation Control
      A Next-Gen Sequencing Software Workflow for Gene Panel Validation...
      DNASTAR offers an integrated suite of software for assembling and analyzing sequence data from all major next-generation sequencing platforms. DNASTAR software supports a variety of key workf...
      Speaker: Matthew Keyser, MS
      Presented at: Genetics and Genomics Virtual Event Series 2014
      11
    SEP 14, 2017 | 9:00 AM
    Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
    Development of tools enabling tunable, in situ delivery of therapeutics...
    The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
    Speaker: Nathan Crook, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    MAY 22, 2017 | 8:00 AM
    WEBINAR: Interactions between the Mycobiome and Bacteriome: Impact on Health and Disease
    WEBINAR: Interactions between the Mycobiome and Bacteriome: Impact...
    DATE: May 22, 2017TIME: 8:00AM PDT, 11:00AM ETCrohn's disease (CD) results from a complex interplay between host genetic factors and endogenous microbial communities. In the current...
    Speaker: Mahmoud Ghannoum, PHD, MBA, FIDSA, FAAM , Shuiquan Tang, PhD
    Sponsored By: Zymo Research
    9
    APR 13, 2017 | 9:00 AM
    Keynote Presentation - DNA Standards and Bioinformatics Benchmarks for Metagenomics
    Keynote Presentation - DNA Standards and Bioinformatics Benchmarks...
    Genomics and metagenomics have become ubiquitous research efforts.  Here we will show details of the development of physical, computational, and even space-based standards for metagenomi...
    Speaker: Christopher Mason, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2017
    2
    APR 12, 2017 | 1:30 PM
    Perspectives for Whole Cell Microbial Reference Materials
    Perspectives for Whole Cell Microbial Reference Materials
    With the exception of the Microbiome Quality Control (MBQC), very little has been published on best practices and reference standards for microbiome and metagenomic studies. As evidenced by r...
    Speaker: J. Russ Carmical, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2017
    2
    APR 12, 2017 | 6:00 AM
    Standards for Microbiome and Metagenomics:  Supporting the Commercial Translation of Microbiome Science
    Standards for Microbiome and Metagenomics: Supporting the Commercial...
    In spite of the huge potential impact of microbiome science, current measurement capabilities are insufficient, particularly for translating discoveries and correlations observed in the lab i...
    Speaker: Jason Kralj, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2017
    4
     
     
  • FEB 22, 2017 | 9:00 AM
    The Microbiome-Gut-Brain Axis: Linking Gastrointestinal and Neurobehavioral Processes in Autism Spectrum Disorder
    The Microbiome-Gut-Brain Axis: Linking Gastrointestinal and Neurobehavioral...
    Gastrointestinal (GI) disorders are now widely recognized as a clinical symptom of autism spectrum disorder (ASD), and research into the microbiome-gut-brain axis is beginning to reveal the i...
    Speaker: Ruth Luna, PhD, MB (ASCP) CM
    Presented at: Precision Medicine Virtual Event Series 2017
    6
    JAN 31, 2017 | 9:00 AM
    WEBINAR: Networks of exchanging antibiotic resistance across human commensal, environmental, and pathogenic bacteria
    WEBINAR: Networks of exchanging antibiotic resistance across human...
    DATE: January 31, 2017TIME: 9:00AM PT, 12:00PM ET Gautam Dantas - While the most acute effects of increasing antibiotic resistance in pathogens are observed in clinical se...
    Speaker: Gautam Dantas, PhD , Shuiquan Tang, PhD
    Sponsored By: Zymo Research, Zymo Research
    18 14
    NOV 03, 2016 | 6:00 AM
    Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
    Mutation Detection Simplified: From Liquid Biopsy in clinical...
    Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
    Speaker: Gerd Michel, PhD , Lou Welebob
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
    5
    SEP 08, 2016 | 12:00 PM
    Plant Viruses: Everywhere and Often Mutualistic
    Plant Viruses: Everywhere and Often Mutualistic
     Virus Ecology is a field that is gaining momentum, fueled in part by metagenomic studies from many environments previously ignored. Biodiversity studies of plant viruses show that they...
    Speaker: Marilyn Roossinck, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2016
    4
    SEP 08, 2016 | 12:00 PM
    Metagenomics: Influencing Agriculture, Environment and More
    Metagenomics: Influencing Agriculture, Environment and More
    This presentation will be demonstrating several different approaches to explore the diversity, function, and ecology of microbial communities.  In Metagenomics, the sequencing of DNA dir...
    Speaker: Clotilde Teiling
    Presented at: Microbiology & Immunology Virtual Event Series 2016
    3
     
     
  • SEP 08, 2016 | 10:30 AM
    The Serious Science of Schmutz: Deep-sequencing the built environment
    The Serious Science of Schmutz: Deep-sequencing the built environment
    The global trend towards industrialization and urbanization has led to ever more people living and working indoors. Some studies estimate that humans in industrialized countries spend as much...
    Speaker: Scott Kelley, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2016
    3
    SEP 08, 2016 | 6:00 AM
    Microbial pathogenesis and host immune response
    Microbial pathogenesis and host immune response
    The research community has begun correlating the makeup of individual microbiomes with disorders and diseases such as obesity, atherosclerosis and cancer. To accomplish this, researchers must...
    Speaker: Krishnan Allampallam, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2016
    5
    SEP 07, 2016 | 6:00 AM
    Invisible Influence: How the indoor microbiome influences health
    Invisible Influence: How the indoor microbiome influences health
    The human race, like all macrobiological life, evolved in a sea of microbes. There was no way to keep the bacterial and archaeal hoards at bay, so instead life evolved mechanisms to live with...
    Speaker: Jack Gilbert, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2016
    2
    JUN 09, 2016 | 9:00 AM
    Standardizing Microbiomics
    Standardizing Microbiomics
    DATE:  June 9, 2016 TIME:   9AM Pacific time, 12pm Eastern time The rapid growth of Microbiomics has increased the demand for standard methods to improve the reproducibility and...
    Speaker: Ryan Kemp, M.S. , Shuiquan Tang, PhD
    Sponsored By: Zymo Research, Zymo Research
    13
    MAY 11, 2016 | 12:00 PM
    Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
    Assembly and Analysis of Non-model Organism Transcriptomes Using...
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
    Speaker: Matthew Keyser, MS
    Presented at: Genetics and Genomics Virtual Event Series 2016
    2
     
     
  • NOV 11, 2015 | 12:00 PM
    DNASTAR Software for Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
    DNASTAR Software for Accurate Variant Detection and Validation...
    DNASTAR offers an integrated suite of software for accurate assembly, alignment, and analysis of sequence data from all major next-generation sequencing platforms, supporting key workflows in...
    Speaker: Matthew Keyser, MS
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2015
    0
    SEP 03, 2015 | 3:00 PM
    Next-Generation Sequencing for Diagnosis and Surveillance of Emerging Infections
    Next-Generation Sequencing for Diagnosis and Surveillance of Emerging...
    Next-generation sequencing (NGS) technologies are powerful approaches for diagnosis and surveillance of emerging infections. Unbiased metagenomic NGS can detect the full spectrum of pathogen...
    Speaker: Charles Chiu, MD, PhD
    Presented at: Microbiology Virtual Event Series 2015
    2
    SEP 03, 2015 | 12:00 PM
    Applying the MinION: microbial genomics and complex metagenomics
    Applying the MinION: microbial genomics and complex metagenomics
    Oxford Nanopore's MinION is a small, portable USB-powered sensing device which is powered by nanopore technology. It is adaptable to the analysis of DNA, RNA, proteins or small molecules, and...
    Speaker: Daniel Turner, PhD
    Presented at: Microbiology Virtual Event Series 2015
    6
    SEP 02, 2015 | 12:00 PM
    DNASTAR Software for Assembly and Analysis of Microbial Genomes
    DNASTAR Software for Assembly and Analysis of Microbial Genomes
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data for key NGS workflows, including microbial genome assembly. The DNASTAR assembly software is...
    Speaker: Matthew Keyser, MS
    Presented at: Microbiology Virtual Event Series 2015
    3
    SEP 02, 2015 | 9:00 AM
    Keynote: Immunology and the Microbiome
    Keynote: Immunology and the Microbiome
    The human race, like all macrobiological life, evolved in a sea of microbes. There was no way to keep the bacterial and archaeal hoards at bay, so instead life evolved mechanisms to live with...
    Speaker: Jack Gilbert, BSc, PhD
    Presented at: Microbiology Virtual Event Series 2015
    10
     
     
  • SEP 02, 2015 | 6:00 AM
    Rapid Tests to Decipher Microbiome Function in Health and Disease
    Rapid Tests to Decipher Microbiome Function in Health and Disease
    Human microbiome projects have delivered our first glimpse into the microbial communities that reside in and on our bodies. Building on these efforts the research community has begun to corre...
    Speaker: Anisha Kharkia, MS
    Presented at: Microbiology Virtual Event Series 2015
    10
    SEP 02, 2015 | 6:00 AM
    Structure and Function of the Human Microbiome
    Structure and Function of the Human Microbiome
    Among many surprising insights, the genomic revolution has helped us to realize that we're never alone and, in fact, barely human. For most of our lives, we share our bodies with some ten ti...
    Speaker: Curtis Huttenhower, PhD
    Presented at: Microbiology Virtual Event Series 2015
    9
    MAY 13, 2015 | 12:00 PM
    DNASTAR Software For Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
    DNASTAR Software For Accurate Variant Detection and Validation...
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including targe...
    Speaker: Matthew Keyser, MS
    Presented at: Genetics and Genomics Virtual Event Series 2015
    2
    AUG 21, 2014 | 12:15 PM
    A Next-Gen Sequencing Software Workflow for Gene Panel Validation Control
    A Next-Gen Sequencing Software Workflow for Gene Panel Validation...
    DNASTAR offers an integrated suite of software for assembling and analyzing sequence data from all major next-generation sequencing platforms. DNASTAR software supports a variety of key workf...
    Speaker: Matthew Keyser, MS
    Presented at: Genetics and Genomics Virtual Event Series 2014
    11
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